Studies On Safe Drugs During Pregnancy

JohnSnowLabs

Files Size Format Created Updated License Source
2 108kB csv zip 1 month ago John Snow Labs Standard License John Snow Labs US Food and Drug Administration
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Data Files

File Description Size Last changed Download
studies-on-safe-drugs-during-pregnancy-csv 23kB csv (23kB) , json (31kB)
studies-on-safe-drugs-during-pregnancy_zip Compressed versions of dataset. Includes normalized CSV and JSON data with original data and datapackage.json. 14kB zip (14kB)

studies-on-safe-drugs-during-pregnancy-csv  

This is a preview version. There might be more data in the original version.

Field information

Field Name Order Type (Format) Description
Medicine 1 string Drugs that are being observed in the study
Medical_Condition 2 string Disease(s) of the patients included in the registry.
Registry 3 string Name of the registry.
Contact 4 string Contact information for the registry (Hospital/Organization, website URL, phone number)
Status 5 string Enrollment stage of the registry.

studies-on-safe-drugs-during-pregnancy_zip  

This is a preview version. There might be more data in the original version.

Read me

Import into your tool

If you are using R here's how to get the data you want quickly loaded:

install.packages("jsonlite", repos="https://cran.rstudio.com/")
library("jsonlite")

json_file <- 'https://datahub.io/JohnSnowLabs/studies-on-safe-drugs-during-pregnancy/datapackage.json'
json_data <- fromJSON(paste(readLines(json_file), collapse=""))

# get list of all resources:
print(json_data$resources$name)

# print all tabular data(if exists any)
for(i in 1:length(json_data$resources$datahub$type)){
  if(json_data$resources$datahub$type[i]=='derived/csv'){
    path_to_file = json_data$resources$path[i]
    data <- read.csv(url(path_to_file))
    print(data)
  }
}

Note: You might need to run the script with root permissions if you are running on Linux machine

In order to work with Data Packages in Pandas you need to install the Frictionless Data data package library and the pandas extension:

import datapackage
import pandas as pd

data_url = 'https://datahub.io/JohnSnowLabs/studies-on-safe-drugs-during-pregnancy/datapackage.json'

# to load Data Package into storage
package = datapackage.Package(data_url)

# to load only tabular data
resources = package.resources
for resource in resources:
    if resource.tabular:
        data = pd.read_csv(resource.descriptor['path'])
        print (data)

For Python, first install the `datapackage` library (all the datasets on DataHub are Data Packages):

pip install datapackage

To get Data Package into your Python environment, run following code:

from datapackage import Package

package = Package('https://datahub.io/JohnSnowLabs/studies-on-safe-drugs-during-pregnancy/datapackage.json')

# get list of all resources:
resources = package.descriptor['resources']
resourceList = [resources[x]['name'] for x in range(0, len(resources))]
print(resourceList)

# print all tabular data(if exists any)
resources = package.resources
for resource in resources:
    if resource.tabular:
        print(resource.read())

If you are using JavaScript, please, follow instructions below:

Install data.js module using npm:

  $ npm install data.js

Once the package is installed, use the following code snippet:

const {Dataset} = require('data.js')

const path = 'https://datahub.io/JohnSnowLabs/studies-on-safe-drugs-during-pregnancy/datapackage.json'

// We're using self-invoking function here as we want to use async-await syntax:
;(async () => {
  const dataset = await Dataset.load(path)
  // get list of all resources:
  for (const id in dataset.resources) {
    console.log(dataset.resources[id]._descriptor.name)
  }
  // get all tabular data(if exists any)
  for (const id in dataset.resources) {
    if (dataset.resources[id]._descriptor.format === "csv") {
      const file = dataset.resources[id]
      // Get a raw stream
      const stream = await file.stream()
      // entire file as a buffer (be careful with large files!)
      const buffer = await file.buffer
      // print data
      stream.pipe(process.stdout)
    }
  }
})()
Datapackage.json