Pretrаgа - the Data Hub

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• Bio2RDF - GenBank

  • api/sparql
  • example/rdf+xml

  • 207 views
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  The Entrez Nucleotide database is a collection of sequences from several sources, including GenBank, RefSeq, and PDB. The number of bases in these databases continues to grow at an...
• Bio2RDF - GOA

  • api/sparql
  • application/x-ntriples
  • example/rdf+xml

  • 645 views
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  The Gene Ontology, or GO, is a major bioinformatics initiative to unify the representation of gene and gene product attributes across all species.
• Bio2RDF - HGNC

  • api/sparql
  • application/x-ntriples
  • application/x-nquads
  • example/rdf+xml

  • 435 views
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  We have already approved over 24,000 symbols; the vast majority of these are for protein-coding genes, but also include symbols for pseudogenes, non-coding RNAs, phenotypes and genomic...
• Bio2RDF - HomoloGene

  • api/sparql
  • application/x-ntriples
  • example/rdf+xml

  • 249 views
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  HomoloGene, a tool of the National Center for Biotechnology Information (NCBI), is a system for automated detection of homologs (similarity attributable to descent from a common ancestor)...
• Bio2RDF - InterPro

  • api/sparql
  • example/rdf+xml

  • 197 views
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  InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to new protein sequences in order to...
• KEGG Compound

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• KEGG Drug

  • api/sparql
  • application/x-ntriples

  • 203 views
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• KEGG Enzyme

  • api/sparql

  • 213 views
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• KEGG Glycan

  • api/sparql
  • application/x-ntriples

  • 121 views
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• KEGG Pathway

  • api/sparql
  • application/x-ntriples

  • 285 views
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• KEGG Reaction

  • api/sparql
  • application/x-ntriples

  • 129 views
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• Mouse Genome Database (MGD) from Mouse Genome Informatics (MGI)

  • api/sparql
  • application/x-ntriples

  • 201 views
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• Bio2RDF - NCBI Gene

  • api/sparql
  • application/x-ntriples

  • 477 views
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  NCBI Gene supplies gene-specific connections in the nexus of map, sequence, expression, structure, function, citation, and homology data. Unique identifiers are assigned to genes with...
• OBO

  • api/sparql
  • application/x-ntriples

  • 81 views
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• OMIM

  • api/sparql
  • application/x-ntriples
  • application/x-nquads

  • 525 views
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• PDB

  • api/sparql

  • 336 views
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• Pfam

  • api/sparql

  • 427 views
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• ProDom

  • api/sparql

  • 339 views
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• PROSITE

  • api/sparql
  • example/rdf+xml

  • 227 views
  • Bez Licence zа jаvne podаtke
  PROSITE consists of documentation entries describing protein domains, families and functional sites as well as associated patterns and profiles to identify them.
• PubChem

  • api/sparql
  • example/rdf+xml

  • 351 views
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