bioportal

This group reflects the collection of datasets (ontologies) in BioPortal.

Dataset

244 dataset hittades.

  • BioPAX
    • 9 views
    • [Öppna Data]
    The BioPAX ontology (www.biopax.org) is a standard language for formally representing biological pathways. BioPAX Level 3 supports the representation of metabolic pathways, signal...
  • A controlled terminology of resources, which is used to improve the sensitivity and specificity of web searches.
  • A small ontology for anatomical spatial references, such as dorsal, ventral, axis, and so forth.
  • BioTop
    • 5 views
    • [Öppna Data]
    A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain.
  • A structured controlled vocabulary for the source of an enzyme. It comprises terms for tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms.
  • The Cancer Chemoprevention Ontology constitutes a vocabulary that is able to describe and semantically interconnect the different paradigms of the cancer chemoprevention domain.
  • CAO
    • 3 views
    • [Öppna Data]
    CAOontology is designed for supporting the COG enrichment study by using Fisher's exact test
  • CareLex
    • 7 views
    • [Öppna Data]
    Categories and terms used to classify content (documents, images, etc) in electronic content repositories for life science / BioPharma. Initial version contains content model for use...
  • An application ontology integrating knowledge about the eukaryotic cell cycle.
  • A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including...
  • A structured classification of chemical compounds of biological relevance.
  • Ontology for Systems Chemical Biology and Chemogenomics
  • Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them.
  • Cell type
    • 7 views
    • [Öppna Data]
    The Cell Ontology is designed as a structured controlled vocabulary for cell types. This ontology was constructed for use by the model organism and other bioinformatics databases, where...
  • The Cell Line Ontology (CLO) is a community-based ontology in domain of biological cell lines with a focus on permanent cell lines from culture collections. Upper ontology structures that...
  • The Clinical Measurement Ontology is designed to be used to standardize morphological and physiological measurement records generated from clinical and model organism research and health...
  • CNO is a controlled vocabulary of terms used in Computational Neurosciences to describe models of the nervous system. This first release of CNO is an alpha version and should be...
  • This ontology defines traits of the International Wheat Information System (IWIS) database and wheat descriptor.
  • The Cognitive Atlas is a collaborative knowledge building project that aims to develop an ontology that characterizes the state of current thought in cognitive science. It defines a set...
  • This ontology is used to describe the experimental conditions within cognitive/behavioral experiments, primarily in humans.